Fate-and-transport modeling of SARS-CoV-2 for rural wastewater-based epidemiology application benefit.

Wastewater-based epidemiology (WBE) for the detection of agents of concern such as severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) has been prevalent in literature since 2020. The majority of reported research focuses on large urban centers with few references to rural communities. In this research the EPA-Storm Water Management Model (EPA-SWMM) software was used to describe a small sewershed and identify the effects of temperature, temperature-affected decay rate, flow rate, flush time, fecal shedding rate, and historical infection rates during the spread of the Omicron variant of the SARS-CoV-2 virus within the sewershed. Due to the sewershed's relative isolation from the rest of the city, its wastewater quality behavior is similar to a rural sewershed. The model was used to assess city wastewater sampling campaigns to best appropriate field and or lab equipment when sampling wastewater. An important aspect of the assessment was the comparison of SARS-CoV-2 quantification methods with specifically between a traditional microbiological lab (practical quantitation limit, PQL, 1 GC/mL) versus what can be known from a field method (PQL 10 GC/mL). Understanding these monitoring choices will help rural communities make decisions on how to best implement the collection and testing for WBE agents of concern. An important outcome of this work is the knowledge that it is possible to simulate a WBE agent of concern with reasonable precision, if uncertainties are incorporated into model sensitivity. These ideas could form the basis for future mixed monitoring-modeling studies that will enhance its application and therefore adoption of WBE techniques in communities of many sizes and financial means.

Incidental Os Odontoideum in an Adolescent Athlete With Sports-Related Concussion.

ABSTRACT: Sports-related concussion (SRC) is a frequent injury in the adolescent population with presentation including a wide array of signs and symptoms. There are no universally agreed upon guidelines for when to pursue advanced imaging, such as magnetic resonance imaging (MRI), in the workup of SRCs in the adolescent population. Our experience indicates that MRI rarely contributes to management. This case report highlights a rare finding of os odontoideum on MRI imaging in an adolescent female soccer player in the setting of treatment of an SRC that altered the course of her clinical management.

Finding new sources of water for semi-arid cities in unlikely places.

Determining alternative water sources to meet municipal water demands is important when availability is limited. The purpose of this study was to demonstrate a means for water planners to estimate the amount of combined sanitary wastewater and storm water that they might already be capturing through open air oxidation ponds. Increased understanding of the quantity of water that is already available could help water planners to better envision optimal water reuse scenarios. Using water and climate data on oxidation ponds in these three cities within the Texas Panhandle from 2010 to 2014, we evaluated water quantities which would be available for potential reuse. From the net monthly wastewater volumes values, the study also considered if per capita demand could have been met by reusing the wastewater. The study found wastewater volumes were lower in fall and winter months and much higher in spring and summer months. If a city considers reusing wastewater, blue water (groundwater) extraction could be reduced by as low as 45-50% in one city to as high as 100% in another. Water planners in similar environments and wastewater treatment systems may find this demonstration of potential reuse water quantity encouraging for better meeting their own water demands and enhancing water supply resiliency.

Distinct substrate specificities of the human tRNA methyltransferases TRMT10A and TRMT10B.

The tRNA m1R9 methyltransferase (Trm10) family is conserved throughout Eukarya and Archaea. Despite the presence of a single Trm10 gene in Archaea and most single-celled eukaryotes, metazoans encode up to three homologs of Trm10. Several disease states correlate with a deficiency in the human homolog TRMT10A, despite the presence of another cytoplasmic enzyme, TRMT10B. Here we investigate these phenomena and demonstrate that human TRMT10A (hTRMT10A) and human TRMT10B (hTRMT10B) are not biochemically redundant. In vitro activity assays with purified hTRMT10A and hTRMT10B reveal a robust activity for hTRMT10B as a tRNAAsp-specific m1A9 methyltransferase and suggest that it is the relevant enzyme responsible for this newly discovered m1A9 modification in humans. Moreover, a comparison of the two cytosolic enzymes with multiple tRNA substrates exposes the enzymes' distinct substrate specificities, and suggests that hTRMT10B exhibits a restricted selectivity hitherto unseen in the Trm10 enzyme family. Single-turnover kinetics and tRNA binding assays highlight further differences between the two enzymes and eliminate overall tRNA affinity as a primary determinant of substrate specificity for either enzyme. These results increase our understanding of the important biology of human tRNA modification systems, which can aid in understanding the molecular basis for diseases in which their aberrant function is increasingly implicated.

Water quality variation with storm runoff and evaporation in playa wetlands.

Playas are the often most noticeable surface water feature in the Southern High Plains. The purpose of our study is to provide local and timely reference data on playa water quality and quantity in drier and wetter weather conditions. Water quality parameters of three playas in Texas, in the summer of 2016, were monitored via weekly environmental sampling. Annual water volume-depth dynamics within the study playas were also estimated by water balance informed by climate and geospatial data. The results showed that both direct rainfall and runoff affect the volume of water within the playa where the volume of runoff entering into a playa is contingent upon the surrounding drainage area. In addition, water quality does vary substantially from playa to playa (conductivity 180-850 µS/cm, TOC 13-81 mg/L) and between playa and non-playa surface water. Differences were related to local soils, drainage area size/slope, and land use. It was also found from the water quality analysis that playas are capable of containing a quality of water that would make them an attractive habitat for wildlife. The greatest economic value of playas may be their ability to contain high quantities of biodiversity though the future of their capacity to do so is uncertain.

In Vitro and In Vivo Activities of Sulfur-Containing Linear Bisphosphonates against Apicomplexan Parasites.

We tested a series of sulfur-containing linear bisphosphonates against Toxoplasma gondii, the etiologic agent of toxoplasmosis. The most potent compound (compound 22; 1-[(n-decylsulfonyl)ethyl]-1,1-bisphosphonic acid) is a sulfone-containing compound, which had a 50% effective concentration (EC50) of 0.11 ± 0.02 µM against intracellular tachyzoites. The compound showed low toxicity when tested in tissue culture with a selectivity index of >2,000. Compound 22 also showed high activity in vivo in a toxoplasmosis mouse model. The compound inhibited the Toxoplasma farnesyl diphosphate synthase (TgFPPS), but the concentration needed to inhibit 50% of the enzymatic activity (IC50) was higher than the concentration that inhibited 50% of growth. We tested compound 22 against two other apicomplexan parasites, Plasmodium falciparum (EC50 of 0.6 ± 0.01 µM), the agent of malaria, and Cryptosporidium parvum (EC50 of ∼65 µM), the agent of cryptosporidiosis. Our results suggest that compound 22 is an excellent novel compound that could lead to the development of potent agents against apicomplexan parasites.

Guide to the littoral zone vascular flora of Carolina bay lakes (U.S.A.).

BACKGROUND: Carolina bays are elliptic, directionally aligned basins of disputed origin that occur on the Atlantic Coastal Plain from the Delmarva Peninsula to southern Georgia. In southeastern North Carolina, several large, natural, lacustrine systems (i.e., Carolina bay lakes) exist within the geomorphological features known as Carolina bays. Within the current distribution of Carolina bays, Bladen and Columbus counties (North Carolina) contain the only known examples of Carolina bay lakes. The Carolina bay lakes can be split into two major divisions, the "Bladen Lakes Group" which is characterized as being relatively unproductive (dystrophic - oligotrophic), and Lake Waccamaw, which stands alone in Columbus County and is known for its high productivity and species richness. Although there have been several studies conducted on these unique lentic systems, none have documented the flora comprehensively. NEW INFORMATION: Over the 2013-2014 growing seasons, the littoral zone flora of Carolina bay lakes was surveyed and vouchered. Literature reviews and herbarium crawls complemented this fieldwork to produce an inventory of the vascular plant species. This survey detected 205 taxa (species/subspecies and varieties) in 136 genera and 80 vascular plant families. Thirty-one species (15.2%) are of conservation concern. Lake Waccamaw exhibited the highest species richness with 145 catalogued taxa and 26 species of conservation concern. Across all sites, the Cyperaceae (25 spp.), Poaceae (21 spp.), Asteraceae (13 spp.), Ericaceae (8 spp.), Juncaceae (8 spp.), and Lentibulariaceae (6 spp.) were the six most species-rich vascular plant families encountered. A guide to the littoral zone flora of Carolina bay lakes is presented herein, including dichotomous keys, species accounts (including abundance, habitat, phenology, and exsiccatae), as well as images of living species and vouchered specimens.

PCDD/F and PCB water column partitioning examination using natural organic matter and black carbon partition coefficient models.

A 9-year water dataset from the Houston Ship Channel (HSC) was analyzed to understand partitioning in polychlorinated biphenyls (PCBs) and polychlorinated dibenzo-p-dioxins/polychlorinated dibenzofurans (PCDD/Fs). Total PCBs had more mass as dissolved (74%) whereas total PCDD/Fs did not (11%). Generally, the limited number of PCDD/Fs (only 2378 substituted) explained these differences though differences in chemical behavior beyond log K ow also likely influence partitioning. The particular fractionation seen in the HSC also seemed related to a wide variation in particulate organic carbon (POC)/dissolved organic carbon (DOC) ratio (0.42-180%). Published and unaltered linear free energy and linear solvation energy relationships for DOC, POC, and particulate black carbon (BC) resulted in predictions that were at best 27% (PCB) and 25% root-mean-square error (RMSE) (PCDD/F) partition fraction compared to observed (using estimated BC/POC fractions of 10 and 25%, respectively). These results show, at least in light of the uncertainties in this data (e.g., precise fraction of BC), that a 25% accuracy in model prediction of operationally dissolved or suspended fraction for any one PCB or PCDD/F congener is the best prediction that may be expected. It is therefore recommended that site-specific data be used to calibrate most any water column-partitioning model if it is to be expected to describe what actually occurs in field conditions.

Polychlorinated biphenyls (PCBs) in industrial and municipal effluents: concentrations, congener profiles, and partitioning onto particulates and organic carbon.

Wastewater effluent samples were collected in the summer of 2009 from 16 different locations which included municipal and industrial wastewater treatment plants and petrochemical industrial outfalls in the Houston area. The effluent samples were analyzed for all 209 polychlorinated biphenyls (PCBs) congeners using high resolution gas chromatography/high resolution mass spectrometry (HRGC/HRMS) using the USEPA method 1668A. The total PCBs (∑209) concentration in the dissolved medium ranged from 1.01 to 8.12 ng/L and ranged from 2.03 to 31.2 ng/L in the suspended medium. Lighter PCB congeners exhibited highest concentrations in the dissolved phase whereas, in the suspended phase, heavier PCBs exhibited the highest concentrations. The PCB homolog concentrations were dominated by monochlorobiphenyls through hexachlorobiphenyls, with dichlorobiphenyls exhibiting the highest concentration amongst them at most of the effluent outfalls, in the suspended phase. Both total suspended solids (TSS) and various organic carbon fractions played an important role in the distribution of the suspended fractions of PCBs in the effluents. The log Koc values determined in the effluents suggest that effluent PCB loads might have more risk and impact than what standard partitioning models predict.

Comparative distribution, sourcing, and chemical behavior of PCDD/Fs and PCBs in an estuary environment.

PCDD/F and PCB field data (1041 samples) in five media (dissolved, suspended sediment, bed sediment, catfish, and blue crab) were studied to explore dual contaminant patterns in the Houston Ship Channel, Texas, USA. PCDD/Fs showed greater concentration than PCBs in suspended sediments while PCBs were higher in apparent dissolved (truly dissolved+DOC-associated), fish, and crab. PCDD/Fs at nearly all locations contributed more strongly to dioxin-like toxicity. The fraction of PCB TEQ was, however, enriched in biotic over abiotic media due in large part to the presence of PCB 126, which was mostly undetected in water and sediment and yet exhibited a BAF three times greater than 2,3,7,8-TCDD. Dissolved-suspended sediment and suspended-bed sediment relationships showed that (1) observed apparent dissolved concentration differences (as fraction of total water were mean 10% PCDD/Fs and 63% PCBs) can reasonably be explained by a four-phase partition model (truly dissolved, DOC-associated, suspended OC, and suspended BC) for PCBs but not for PCDD/Fs and (2) the contaminants behaved similarly in bed to suspended sediment concentration ratios (C(bed)/C(susp)) upstream of a major confluence but not downstream. PCA-cluster analysis pointed to the possibility that suspended sediment PCB contamination originates from resuspended bed sediment while PCDD/Fs in suspended sediment originates more probably from other sediment sources such as upstream wash load or air deposition. Finally, examinations of a congener marker ratio (PCB 209/206) seemed to indicate that a source of pure PCB 209 may exist in bed sediment near Patrick Bayou though the source was not completely localized.

PCB dry and wet weather concentration and load comparisons in Houston-area urban channels.

All 209 PCB congeners are quantified in water in both dry and wet weather urban flows in Houston, Texas, USA. Total water PCBs ranged from 0.82 to 9.4ng/L in wet weather and 0.46 to 9.0ng/L in dry. Wet weather loads were 8.2 times higher (by median) than dry weather with some increases of over 100-fold. The majority of the PCB load was in the dissolved fraction in dry weather while it was in the suspended fraction in wet weather. Dissolved PCB loads were correlated with rain intensity and highly developed land area, and a multiple linear regression (MLR) equation was developed to quantify these correlations. PCA generated five PCB components with nearly all positive loadings. They were interpreted as DOC-associated A1248, wet weather primarily suspended fraction A1254/A1260 likely from building sealants, truly dissolved-associated wastewater dechlorination, watershed-sourced PCB 11, and monochlorinated PCBs (likely connected to a different state or source of dechlorination). The PCB 11 component was statistically higher in wet versus dry weather when no other component showed such clear distinctions. Hierarchical cluster analysis (HCA) did not always group dry and wet weather samples from the same location together illustrating the different congener composition that often exists between dry and wet conditions. Four wet weather samples from high percentage developed land (>90%) watersheds had nearly the same fingerprint suggesting a generic "urban" signature in runoff, which in this case was caused by residual A1254/A1260 PCB stocks and currently produced PCB 11 in consumer goods.

Spatial and temporal variation of polychlorinated biphenyls in the Houston Ship Channel.

An on-going study in the Houston Ship Channel (HSC) characterized polychlorinated biphenyl (PCB) levels in sediment, water, and tissue in 2002-2003 and 2008. The observed PCB concentration ranges in all media were higher than those measured in other PCB-impacted water bodies in the world, with the highest concentrations occurring within the industrialized segments. Contrary to polychlorinated dibenzo-p-dioxins/polychlorinated dibenzofurans (PCDD/PCDF) observations, the PCB concentrations in the dissolved phase were greater than the suspended phase. Possible explanations include passage of colloids, competition for adsorption sites from other hydrophobic contaminants, and continuing current sources. The PCB homologue distributions were similar for suspended water, sediment and tissue with the profile normalized around penta-chlorobiphenyls, while the dissolved phase profile normalized around tri-chlorobiphenyls. PCB-209 was detected in the suspended water phase and in sediment (10%) prompting interest into its sources to the HSC since PCB-209 was present only in rare commercial mixtures and is a byproduct in very few manufacturing processes. Inter-media analyses showed a significant correlation and transfer of PCBs. Dioxin-like PCBs contributed significant toxicity to total equivalent in tissue (33%), while they were insignificant in water (<10%) and sediment (<5%). The PCB concentrations over time showed a significant decrease in suspended water, sediment and tissue, while dissolved water concentrations showed insignificant change. The homolog distribution, however, showed a significant change in dissolved water and fish, a minor change in sediment and insignificant change in suspended water. Furthermore, an analysis for six representative congeners showed that they were accurate in predicting the total PCB concentrations and could be thus used as indicator PCBs.

Concentrations of polychlorinated biphenyls (PCBs) in water, sediment, and aquatic biota in the Houston Ship Channel, Texas.

Polychlorinated biphenyls (PCBs) were quantified in water, sediment, and catfish and crab tissue collected from the Houston Ship Channel (HSC) in Texas. The total concentrations of the 209 PCB congeners ranged from 0.49 to 12.49 ng l(-1), 4.18 to 4601 ng g(-1) dry wt, 4.13 to 1596 ng g(-1) wet wt, and 3.44 to 169 ng g(-1) wet wt, in water, sediment, catfish and crab tissue, respectively. All media showed maximum concentrations greater than studies in other regions with the highest concentrations occurring in the most industrialized segments of the channel. Inter-media correlations suggested that sediment is a source to water. Galveston Bay sediment concentrations compared to a previous study showed a declining trend though the rate of the decline may be slowing. Detailed homolog profiles revealed that the industrialized part of the channel may be receiving PCB-laden sediment from its tributaries. An unusually high fraction of the deca-chlorinated congener (PCB-209) was found in all media. Seen in only a few other studies and in previous air concentrations in the channel, this may point to unusual Aroclor mixtures used in the history of the HSC or to contemporary sources from local industry. A comparison of PCB concentrations obtained using Aroclor, representative congener, and all congener methods, indicated that Aroclors are not an appropriate surrogate for total PCBs and that the NOAA NST method is more representative than the NOAA EPA method.